Codes and Datasets for CRF-PPI

Codes and Datasets

Click here to download the datasets and here to download source codes of CRF-PPI.


Zhi-Sen Wei, Jing-Yu Yang, Hong-Bin Shen and Dong-Jun Yu*. A Cascade Random Forests Algorithm for Predicting Protein-Protein Interaction Sites. IEEE Transactions on NanoBioscience. 2015, 14(7): 746-760.

Dset186 and Dtestset72:   Murakami Y and Mizuguchi K. Applying the Naive Bayes classifier   with kernel density estimation to the prediction of proteinɃprotein   interaction sites. Bioinformatics. 2010, 26(15): 1841-1848.

PDBtestset164: Dhole K, Singh G, Pai PP and Mondal S.  Sequence-based prediction of protein-protein interaction sites with L1-logreg classifier. Journal of theoretical biology. 2014, 348: 47-54.

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