Codes and Datasets for Protein-Protein Interaction Sites

Codes and Datasets

Click here to download the datasets and here to download source codes of PPIS.


 Guang-Hui Liu, Hong-Bin Shen, and Dong-Jun Yu. Prediction of Protein-Protein Interaction Sites with Machine Learning based Data-Cleaning and Post-Filtering Procedures. The Journal of membrane biology, 2016, 249(1-2): 141-153.

Dset186 and Dtestset72: Murakami Y and Mizuguchi K (2010) Applying the Naive Bayes classifier with kernel density estimation to the prediction of protein-protein interaction sites. Bioinformatics 26: 1841-1848.

PDBtestset164: Dhole K, Singh G, Pai PP and Mondal S (2014) Sequence-based prediction of protein-protein interaction sites with L1-logreg classifier. Journal of theoretical biology 348: 47-54.

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